82: JAK2 inhibition drives RAS clonal selection in myelofibrosis
Base by Base21 Heinä 2025

82: JAK2 inhibition drives RAS clonal selection in myelofibrosis

Maslah N et al., Nature Communications - Translational study showing ruxolitinib and JAK2 suppression select for RAS pathway–mutant clones in myelofibrosis, enhancing their fitness via MAPK activation and linking this selection to worse clinical outcomes in treated patients. Key terms: ruxolitinib, JAK2, RAS mutations, myelofibrosis, clonal evolution.

Study Highlights:
Longitudinal NGS of 143 myelofibrosis patients and targeted analyses show ruxolitinib exposure is associated with accumulation and increased VAF of NRAS/KRAS/CBL mutations compared with non-exposed patients. Single-cell DNA sequencing and ex vivo CD34+ assays demonstrate ruxolitinib selects RAS-mutant clones both inside and outside JAK/STAT-activated driver clones. In vitro and in vivo competition models and Jak2 knockdown reveal JAK2 inhibition increases RAS-mutant cellular fitness via MAPK pathway activation and release from oncogene-induced senescence. Clinically, RAS pathway mutations predict worse transformation-free and overall survival only in ruxolitinib-treated patients.

Conclusion:
JAK2 inhibition can promote selection and expansion of RAS-mutant clones in MPNs through MAPK-driven fitness advantages, supporting RAS screening and consideration of combinatorial strategies when using JAK inhibitors.

Music:
Enjoy the music based on this article at the end of the episode.

Article title:
JAK2 inhibition mediates clonal selection of RAS pathway mutations in myeloproliferative neoplasms

First author:
Maslah N

Journal:
Nature Communications

DOI:
10.1038/s41467-025-60884-1

Reference:
Maslah N, Kaci N, Roux B, et al. JAK2 inhibition mediates clonal selection of RAS pathway mutations in myeloproliferative neoplasms. Nat Commun. 2025;16:6270. doi:10.1038/s41467-025-60884-1

License:
This episode is based on an open-access article published under the Creative Commons Attribution 4.0 International License (CC BY 4.0) – https://creativecommons.org/licenses/by/4.0/

Support:
Base by Base – Stripe donations: https://donate.stripe.com/7sY4gz71B2sN3RWac5gEg00

Official website https://basebybase.com

On PaperCast Base by Base you'll discover the latest in genomics, functional genomics, structural genomics, and proteomics.

Episode link: https://basebybase.com/episodes/ep82-jak2-inhibition-ras-selection-mpn

QC:
This episode was checked against the original article PDF and publication metadata for the episode release published on 2025-07-21.

QC Scope:
- article metadata and core scientific claims from the narration
- excludes analogies, intro/outro, and music
- transcript coverage: Audited transcript sections covering JAK2 inhibition, Ras/MAPK clonal selection, single-cell sequencing and ex vivo CD34+ cell data, in vivo murine competition models, clinical outcome associations, and therapeutic implications.
- transcript topics: JAK-STAT signaling and JAK inhibitors; RAS pathway mutations and clonal selection (NRAS/KRAS/CBL); Single-cell sequencing and ex vivo CD34+ cell experiments; In vivo murine bone marrow competition and transplantation models; MAPK activation and rescue from oncogene-induced senescence; Clinical outcomes: transformation-free survival and overall survival

QC Summary:
- factual score: 10/10
- metadata score: 10/10
- supported core claims: 6
- claims flagged for review: 0
- metadata checks passed: 4
- metadata issues found: 0

Metadata Audited:
- article_doi
- article_title
- article_journal
- license

Factual Items Audited:
- Ruxolitinib exposure is associated with accumulation/selection of RAS pathway mutations (NRAS, KRAS, CBL) in myelofibrosis patients.
- RAS mutations predict worse transformation-free survival and overall survival primarily in the context of ruxolitinib treatment.

Tämä jakso on lisätty Podme-palveluun avoimen RSS-syötteen kautta eikä se ole Podmen omaa tuotantoa. Siksi jakso saattaa sisältää mainontaa.

Jaksot(441)

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

Longo LM et al., PNAS - This episode summarizes a PNAS study introducing CLSS, a contrastive two-tower protein language model that coembeds domain sequences, structures, and subsequences into a shared...

11 Elo 23min

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

Axakova A et al., The American Journal of Human Genetics - Axakova et al. generated a variant effect map for AIRE using an insulin‑promoter GFP reporter in HEK293 cells to measure the functional impac...

10 Elo 24min

437: Cell villages and Dirichlet modeling map human cell fitness genetics

437: Cell villages and Dirichlet modeling map human cell fitness genetics

Hanson C et al., The American Journal of Human Genetics - Hanson et al. combine pooled multi-donor human neural progenitor cell "villages" with Townlet, a hierarchical Dirichlet regression model, to e...

9 Elo 28min

436: KIAP4 and the ARND family: building the Leishmania adhesion plaque

436: KIAP4 and the ARND family: building the Leishmania adhesion plaque

Owino BO et al., PNAS - Using TurboID proximity proteomics and microscopy, researchers identify KIAP4 as the canonical member of a conserved Adhesion Related NTPase-like Domain (ARND) family that loca...

8 Elo 24min

435: E. coli TGT binds two tRNAs — cryo-EM reveals dual engagement

435: E. coli TGT binds two tRNAs — cryo-EM reveals dual engagement

Ember M et al., PNAS - This episode examines a cryo-EM study of Escherichia coli tRNA-guanine transglycosylase (TGT) that solves the enzyme structure and its covalent intermediate with tRNATyr. Unexpe...

7 Elo 19min

434: High‑coverage genomes recast Japan's prehistoric demography

434: High‑coverage genomes recast Japan's prehistoric demography

Ishiya K et al., PNAS - This episode examines a PNAS study that reports two high-coverage ancient human genomes from mainland Japan (an Initial Jomon >67× and a Middle Yayoi >46×). The genomes enable ...

6 Elo 27min

433: Lactate, HSP90α and the Mitochondrial Switch

433: Lactate, HSP90α and the Mitochondrial Switch

Wu G et al., Proceedings of the National Academy of Sciences - This episode examines a PNAS study that identifies site-specific lactylation of HSP90α as a metabolic signal linking glycolysis to mitoch...

23 Heinä 23min

432: Echovirus 18: Capsid opening releases the genome

432: Echovirus 18: Capsid opening releases the genome

Mukhamedova L et al., Proceedings of the National Academy of Sciences - Using cryo-electron tomography and single-particle cryo-EM of infected Cos-7 cells, the authors show that echovirus 18 (E18) rel...

23 Heinä 18min

Suosittua kategoriassa Tiede

tiedekulma-podcast
rss-poliisin-mieli
rss-mita-tulisi-tietaa
rss-hereilla
rss-bios-podcast
filocast-filosofian-perusteet
hippokrateen-vastaanotolla
rss-sosiopodi
rss-duodecim-lehti
rss-murremyytin-murtajat
utelias-mieli
rss-astetta-parempi-elama-podcast
rss-totuuden-liepeilla
rss-metsanomistaja-podcast
rss-lapsuuden-rakentajat-podcast