Base by Base

Base by Base

Base by Base explores advances in genetics and genomics, with a focus on gene-disease associations, variant interpretation, protein structure, and insights from exome and genome sequencing. Each episode breaks down key studies and their clinical relevance—one base at a time. Powered by AI, Base by Base offers a new way to learn on the go. Special thanks to authors who publish under CC BY 4.0, making open-access science faster to share and easier to explore.

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Episoder(440)

374: DNA-guided Cas12a reprogrammed to target RNA

374: DNA-guided Cas12a reprogrammed to target RNA

Wu X et al., Nature Biotechnology - The authors engineer synthetic PAM-containing DNA guides (crDNA) that bind Cas12a to form a deoxyribonucleoprotein (DNP) complex that recognizes and cleaves complem...

22 Mai 20min

373: Base by Base 373 — A ciliate rewrites UAA and UAG

373: Base by Base 373 — A ciliate rewrites UAA and UAG

McGowan J et al., PLOS Genetics - Genome and transcriptome sequencing of an uncultured Oligohymenophorea ciliate (PL0344) reveals a novel nuclear genetic code in which UAA translates as lysine and UAG...

21 Mai 21min

372: Genes, IQ and Socioeconomic Outcomes in Emerging Adults

372: Genes, IQ and Socioeconomic Outcomes in Emerging Adults

Kajonius PJ et al., Scientific Reports - This episode examines a twin-study analysis from the German TwinLife panel showing that cognitive ability at age 23 predicts socioeconomic status at age 27, an...

20 Mai 24min

371: Glial epigenomic dysregulation and genetic risk in tauopathies

371: Glial epigenomic dysregulation and genetic risk in tauopathies

Han et al., Nature Communications - This study uses paired single-nucleus chromatin accessibility and gene expression profiling across Alzheimer’s disease, Pick’s disease and progressive supranuclear ...

19 Mai 26min

370: ICMT and INPP5E enable BRAFV600E tumor growth

370: ICMT and INPP5E enable BRAFV600E tumor growth

Yang X et al., Proceedings of the National Academy of Sciences - Genetic and pharmacologic inhibition of ICMT suppresses proliferation, invasion, and tumor growth in BRAFV600E-driven models and identi...

18 Mai 23min

369: NEK2 drives EBV-positive NHL pathogenesis

369: NEK2 drives EBV-positive NHL pathogenesis

White MC et al., PNAS - This episode reviews a PNAS study showing that the kinase NEK2 is upregulated by EBV and its latency proteins and that NEK2 inhibition with the irreversible inhibitor JH295 sel...

16 Mai 24min

368: PARP1 and Amyloid: Protecting Neurons in a Familial AD Model

368: PARP1 and Amyloid: Protecting Neurons in a Familial AD Model

Jhaldiyal A et al., PNAS - This episode summarizes a PNAS study showing that PARP1 activation links Aβ1-42 toxicity to DNA damage, amyloid accumulation, neuroinflammation, and cognitive deficits, and ...

16 Mai 26min

367: Ancestral Splice Variation Fuels Cichlid Jaw Diversification

367: Ancestral Splice Variation Fuels Cichlid Jaw Diversification

Singh P et al., PNAS - This paper compares alternative splicing (AS) and gene expression (GE) across 200 transcriptomes from oral and pharyngeal jaws of 18 haplochromine cichlid species across Lakes V...

15 Mai 22min

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