Base by Base

Base by Base

Base by Base explores advances in genetics and genomics, with a focus on gene-disease associations, variant interpretation, protein structure, and insights from exome and genome sequencing. Each episode breaks down key studies and their clinical relevance—one base at a time. Powered by AI, Base by Base offers a new way to learn on the go. Special thanks to authors who publish under CC BY 4.0, making open-access science faster to share and easier to explore.

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Episoder(440)

72: POC5 ciliopathy: retinal, endocrine and neuromuscular syndrome

72: POC5 ciliopathy: retinal, endocrine and neuromuscular syndrome

Vulto-van Silfhout AT et al., Genetics in Medicine - A cohort study of twelve families shows that bi-allelic loss-of-function variants in POC5 cause a multisystem syndrome characterized by rod-cone dy...

11 Jul 202519min

71: ELFN1 Deficiency: Mechanisms and Clinical Spectrum

71: ELFN1 Deficiency: Mechanisms and Clinical Spectrum

Dore R et al., Genetics in Medicine - This episode reviews a multi-center study that defines ELFN1 deficiency as a recessive neurodevelopmental disorder. The authors report new patients with biallelic...

10 Jul 202525min

70: MSA and ternary-code DNA methylation

70: MSA and ternary-code DNA methylation

Goldberg DC et al., Cell Genomics - This episode examines the methylation screening array (MSA), a compact Infinium BeadChip optimized for trait-associated and cell-type CpGs and compatible with match...

9 Jul 202519min

69: PLK1 overexpression exposes an IGF2BP2 vulnerability

69: PLK1 overexpression exposes an IGF2BP2 vulnerability

Cunningham C et al., Cell Genomics - This study used orthotopic breast PDX models, pooled and arrayed CRISPR/Cas9 screens, and Direct‑Capture Perturb‑seq to search for synthetic‑dosage‑lethal (SDL) pa...

8 Jul 202516min

68: Indels Enable One-Step Antiviral Innovation in TRIM5a

68: Indels Enable One-Step Antiviral Innovation in TRIM5a

Tenthorey JL et al., Cell Genomics - This episode examines a study showing that insertion/deletion mutations (indels) in the v1 loop of the antiviral protein TRIM5a can create new viral specificities ...

7 Jul 202516min

67: M-REGLE: Multimodal AI improves genetic prediction of cardiovascular traits

67: M-REGLE: Multimodal AI improves genetic prediction of cardiovascular traits

Zhou Y et al., The American Journal of Human Genetics - This episode explores M-REGLE, a multimodal deep‑learning pipeline that jointly learns representations from ECG and PPG waveforms to boost GWAS ...

6 Jul 202514min

66: Mainstreaming Clinical Genetic Testing: A Conceptual Framework

66: Mainstreaming Clinical Genetic Testing: A Conceptual Framework

Mackley MP et al., Genetics in Medicine - This episode summarizes a consensus-derived framework for mainstreaming clinical genetic testing developed from a Canadian expert focus group. The framework d...

5 Jul 202520min

65: Hidden splice variants in FBN1 — genome sequencing finds Marfan diagnoses

65: Hidden splice variants in FBN1 — genome sequencing finds Marfan diagnoses

Walker S et al., Genetics in Medicine - This episode reviews a systematic analysis of ultra-rare FBN1 variants in the 100,000 Genomes Project using SpliceAI, RNA assays and minigene tests. The study i...

4 Jul 202518min

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