Base by Base

Base by Base

Base by Base explores advances in genetics and genomics, with a focus on gene-disease associations, variant interpretation, protein structure, and insights from exome and genome sequencing. Each episode breaks down key studies and their clinical relevance—one base at a time. Powered by AI, Base by Base offers a new way to learn on the go. Special thanks to authors who publish under CC BY 4.0, making open-access science faster to share and easier to explore.

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Episoder(440)

414: Durability of Cas9 Gene Drives in Anopheles: A 2‑Year Cage Study

414: Durability of Cas9 Gene Drives in Anopheles: A 2‑Year Cage Study

Carballar-Lejarazúa R et al., PNAS (2026) - This episode summarizes a 2-year, 35-generation multireplicate cage trial evaluating three autonomous Cas9/gRNA gene-drive strains (AcTP13, AcTP43 in Anophe...

17 Jul 31min

413: Rpc34 WH2 dynamics in RNA polymerase III

413: Rpc34 WH2 dynamics in RNA polymerase III

Wu J-S et al., PNAS - A PNAS study using smFRET and nano-positioning triangulation maps dynamic positioning of the Rpc34 WH2 domain in yeast Pol III elongation complexes and presents a thiol-capping S...

12 Jul 15min

412: Fault Lines in Forensic Proficiency Testing

412: Fault Lines in Forensic Proficiency Testing

Scurich N et al., PNAS - A concise breakdown of a PNAS perspective that analyzes forensic proficiency testing practices using the 2023 CTS firearms test as a case study. The authors identify test desi...

12 Jul 28min

411: EKV cells and the Human Prion Assay: a scalable platform for sCJD infectivity

411: EKV cells and the Human Prion Assay: a scalable platform for sCJD infectivity

Nihata A et al., PNAS - This PNAS study describes the development of EKV, a humanized dividing cell line that propagates bona fide sporadic CJD (sCJD) prions, and the Human Prion Assay (HPA), a cell-b...

9 Jul 26min

410: Nucleotide diversity is a poor predictor of short-term adaptive potential

410: Nucleotide diversity is a poor predictor of short-term adaptive potential

Abson KL et al., PNAS - A cross-species synthesis and theory paper showing that simple molecular diversity metrics poorly predict short-term adaptive potential. The authors compiled >2,100 quantitativ...

8 Jul 21min

409: A systems-level atlas of carbon-response transcriptional states in Escherichia coli

409: A systems-level atlas of carbon-response transcriptional states in Escherichia coli

Shin J et al., PNAS - This episode examines a large transcriptome compendium (PRECISE-NP881) that profiles E. coli K-12 MG1655 across 43 carbon substrates. Independent component analysis resolved 137 ...

7 Jul 27min

408: Tau, mitochondria, and the fusion switch

408: Tau, mitochondria, and the fusion switch

Tsakiria E et al., Proceedings of the National Academy of Sciences (PNAS) - Using Tau knockout mice and the C. elegans PTL-1 deletion, this study shows that loss of wild-type Tau promotes a conserved ...

6 Jul 24min

407: SLC11A2 withholds metals from Salmonella in the gut epithelium

407: SLC11A2 withholds metals from Salmonella in the gut epithelium

Norberg ES et al., Proceedings of the National Academy of Sciences - Using metal‑responsive fluorescent Salmonella reporters, calf intestinal loops, and CRISPR edited epithelial cells, this study show...

5 Jul 21min

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